FastQCFastQC Report
Mon 25 Mar 2013
101.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 101.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 31312005
Filtered Sequences 0
Sequence length 49
%GC 50

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 1567977 5.007590539155828 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1517070 4.845010723522815 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1316804 4.205428556874591 RNA PCR Primer, Index 1 (100% over 27bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 1207448 3.856182317293319 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 981369 3.1341621208862227 RNA PCR Primer, Index 1 (100% over 26bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 684771 2.1869279849693433 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 618652 1.9757661638084179 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 576557 1.8413289088322515 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 574239 1.8339259973930129 RNA PCR Primer, Index 1 (100% over 25bp)
TCTCCCAACCCTTGTACCAGTGTGGAATTCTCGGGTGCCAAGGAACTCC 549521 1.7549850289050477 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 481748 1.5385408887102567 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 464855 1.4845903352404295 No Hit
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 413358 1.3201262582833644 RNA PCR Primer, Index 1 (100% over 28bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 385771 1.2320226698992927 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 364006 1.1625125890213674 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 301733 0.9636335967626475 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 287208 0.917245637895114 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 276308 0.8824347083490822 RNA PCR Primer, Index 1 (100% over 27bp)
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 262042 0.8368739082661746 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 259827 0.8297999441428295 RNA PCR Primer, Index 1 (100% over 27bp)
TCTCCCAACCCTTGTACCAGTGTTGGAATTCTCGGGTGCCAAGGAACTC 225004 0.7185870084014102 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 216468 0.6913258988046278 RNA PCR Primer, Index 1 (100% over 25bp)
TCTCCCAACCCTTGTACCAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 211123 0.6742557686740277 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 211084 0.6741312158068447 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGGCTTTGGAATTCTCGGGTGCCAAGGA 181498 0.5796434945638262 RNA PCR Primer, Index 1 (100% over 22bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 181161 0.5785672300448342 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGATGGAATTCTCGGGTGCCAAGGAACTCCA 179331 0.5727228262770142 RNA PCR Primer, Index 1 (100% over 28bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 179187 0.5722629387674152 RNA PCR Primer, Index 1 (100% over 27bp)
TCGAGGAGCTCACAGTCTAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 166709 0.5324124085953614 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 159024 0.5078691064337784 RNA PCR Primer, Index 1 (100% over 25bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 157917 0.5043337212037363 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 155201 0.49565973178657835 RNA PCR Primer, Index 1 (100% over 26bp)
TGCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTG 152351 0.4865577914924324 No Hit
TCTCCCAACCCTTGTACCAGTGATGGAATTCTCGGGTGCCAAGGAACTC 126619 0.40437844845770815 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 117133 0.37408335876287707 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 116669 0.3726014990097249 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 115976 0.3703882903697799 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 115377 0.3684752860763787 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 112952 0.36073065266820187 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 110235 0.3520534695877827 RNA PCR Primer, Index 1 (100% over 26bp)
AGTGTTTCCTACTTTATGGATGTGGAATTCTCGGGTGCCAAGGAACTCC 107905 0.3446122341894107 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 103478 0.330473886932504 RNA PCR Primer, Index 1 (100% over 28bp)
CTGACCTATGAATTGACAGCCTGGAATTCTCGGGTGCCAAGGAACTCCA 102644 0.3278103717727434 RNA PCR Primer, Index 1 (100% over 28bp)
TGTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTC 97153 0.31027396680602215 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 96274 0.30746673679951186 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 87789 0.28036850402904573 RNA PCR Primer, Index 1 (100% over 26bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 85963 0.27453687491427015 RNA PCR Primer, Index 1 (100% over 26bp)
GCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTGC 82483 0.2634229267656287 No Hit
CGACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 81952 0.26172709157398255 RNA PCR Primer, Index 1 (100% over 33bp)
CAACGGAATCCCAAAAGCAGCTGTTGGAATTCTCGGGTGCCAAGGAACT 80703 0.2577382061608639 RNA PCR Primer, Index 1 (100% over 25bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 76686 0.2449092608410097 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 73611 0.23508874631311535 RNA PCR Primer, Index 1 (100% over 26bp)
GACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 72101 0.23026631478884857 RNA PCR Primer, Index 3 (100% over 34bp)
CATAAAGTAGAAAGCACTACTATGGAATTCTCGGGTGCCAAGGAACTCC 69931 0.22333606551225318 RNA PCR Primer, Index 1 (100% over 27bp)
TCAGTGCACTACAGAACTTTGTCTGGAATTCTCGGGTGCCAAGGAACTC 69220 0.22106537093360837 RNA PCR Primer, Index 1 (100% over 26bp)
TCGAGGAGCTCACAGTCTAGTATGGAATTCTCGGGTGCCAAGGAACTCC 65989 0.21074664493698184 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 63224 0.2019161660200297 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCAGCACGTAAATATTGGTGTGGAATTCTCGGGTGCCAAGGAACTCC 62306 0.19898438314633637 RNA PCR Primer, Index 1 (100% over 27bp)
CCCATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCC 62235 0.19875763305479802 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 61166 0.19534360702867798 RNA PCR Primer, Index 1 (100% over 25bp)
AACATTCAACGCTGTCGGTGAGATGGAATTCTCGGGTGCCAAGGAACTC 61055 0.19498911040669545 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 59609 0.19037107333113928 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTTTGGAATTCTCGGGTGCCAAGGAACT 57980 0.18516859587880113 RNA PCR Primer, Index 1 (100% over 25bp)
TGTAAACATCCCCGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 56855 0.18157572471005928 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTACACTCTCAGCTTGGAATTCTCGGGTGCCAAGGAACT 56210 0.1795158119066473 RNA PCR Primer, Index 1 (100% over 25bp)
CATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCCAG 53910 0.17217038640610846 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 51840 0.1655595034556235 RNA PCR Primer, Index 1 (100% over 26bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 50497 0.16127041369596104 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCACCATCTGAAATCGGTTTGGAATTCTCGGGTGCCAAGGAACTCCA 50463 0.16116182914508348 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 49514 0.15813104271029593 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCTACACTCAGCTTGGAATTCTCGGGTGCCAAGGAACTCC 49207 0.15715058808913707 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 48425 0.15465314341895386 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATTCAGGATAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 47950 0.15313615336992953 RNA PCR Primer, Index 1 (100% over 28bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 47483 0.15164471262699403 No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 47017 0.15015646554731962 No Hit
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 47000 0.15010217327188088 RNA PCR Primer, Index 1 (100% over 28bp)
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 45573 0.14554481579828565 No Hit
TTCACAGTGGCTAAGTTCTGCTTGGAATTCTCGGGTGCCAAGGAACTCC 45404 0.14500508670715911 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGAATTCTCCTTTTGGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 45275 0.14459310414647672 RNA PCR Primer, Index 1 (100% over 28bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 44286 0.14143457118124503 RNA PCR Primer, Index 1 (100% over 24bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 42597 0.13604047393324062 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGTTTGTACAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 41945 0.1339582054870009 RNA PCR Primer, Index 1 (100% over 28bp)
ATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 40800 0.130301461053037 RNA PCR Primer, Index 1 (100% over 29bp)
TGTAAACATCCCCGACTGGATGGAATTCTCGGGTGCCAAGGAACTCCAG 40327 0.12879085833053489 RNA PCR Primer, Index 1 (100% over 29bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 40032 0.12784872766850927 No Hit
CTAGACTGAAGCTCCTTGAGGATGGAATTCTCGGGTGCCAAGGAACTCC 39332 0.12561316338573655 RNA PCR Primer, Index 1 (100% over 27bp)
CTAGACTGAAGCTCCTTGAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 37989 0.1213240736260741 RNA PCR Primer, Index 1 (100% over 28bp)
GTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTCC 37759 0.1205895310760202 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTTTGGAATTCTCGGGTGCCAAGGAACT 37606 0.12010090059707132 RNA PCR Primer, Index 1 (100% over 25bp)
TCTCCCAACCCTTGTACCAGTGGAATTCTCGGGTGCCAAGGAACTCCAG 36757 0.11738948048839414 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGTGATGATAAAGTATATCTGAGGTGGAATTCTCGGGTGCCAAGGA 36722 0.1172777022742555 RNA PCR Primer, Index 1 (100% over 22bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 36275 0.11585013479654209 RNA PCR Primer, Index 1 (100% over 27bp)
ACCCCGTGATGGAACTGAGGATCTGAGGTGGAATTCTCGGGTGCCAAGG 35920 0.11471638433885023 Illumina RNA RT Primer (100% over 21bp)
TGTAAACATCCTTGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 35603 0.1137039930850803 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 34325 0.10962249143738959 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCACCATCTGAAATCGGTTATGGAATTCTCGGGTGCCAAGGAACTCC 33955 0.10844083603078117 RNA PCR Primer, Index 1 (100% over 27bp)
ACCGGGCGGAAACACCATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 33400 0.10666835292086853 RNA PCR Primer, Index 1 (100% over 32bp)
TAGCACCATCTGAAATCGGTTGGAATTCTCGGGTGCCAAGGAACTCCAG 33211 0.10606475056451989 RNA PCR Primer, Index 1 (100% over 29bp)
TTCAAGTAATCCAGGATAGGCATGGAATTCTCGGGTGCCAAGGAACTCC 32126 0.10259962592622224 RNA PCR Primer, Index 1 (100% over 27bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 31996660 27.46213 429.9187 28
AATTC 32390140 26.667295 413.02142 26
ATTCT 31941335 25.420586 399.00632 27
TGCCA 31062485 25.183012 404.28775 36
TCTCG 31688545 24.833624 392.45236 29
GCCAA 29242910 24.525948 418.77692 37
CCAAG 29219235 24.50609 418.86804 38
AACTC 25260485 23.202703 457.9332 44
GAACT 30811090 23.16229 374.95822 43
CTCGG 31650930 22.64814 358.3227 30
GAATT 32272895 21.746107 338.6469 25
GTGCC 30174905 21.591955 357.29114 35
CAAGG 29126975 19.993 342.90393 39
GGAAT 32266485 19.85196 309.11255 24
TGGAA 32217440 19.821787 309.0478 23
ACTCC 19685175 19.499945 494.05453 45
GGAAC 28099845 19.287968 342.64804 42
TCGGG 31266300 18.310488 293.28757 31
AAGGA 28620470 18.216389 317.7688 40
CGGGT 31028365 18.17115 292.68045 32
AGGAA 28224465 17.964338 318.07254 41
GGTGC 30599850 17.920195 292.63107 34
GGGTG 30897070 14.808742 239.55006 33
TTGGA 17908080 10.650429 193.01091 22
CTCCA 8540660 8.460295 188.73183 45
TCCAG 6444365 5.2245827 79.10686 10
CCAGT 6008290 4.871048 60.25968 7
CTTGG 6974250 4.473142 63.81293 21
TTCAA 4826355 3.973611 95.70103 1
CTGGA 5234945 3.4734497 32.600513 16
ACTTG 4585485 3.332161 44.91141 7
ATGGA 5142750 3.164078 44.47795 22
GTTGG 5985735 3.1420283 56.66315 21
TGTTG 5251945 3.019288 59.690502 20
AAGTA 4315290 3.0080652 83.16748 4
GACTG 4451575 2.9536743 60.72285 11
TTTGG 5117935 2.9422474 65.86879 21
AGTAG 4780710 2.9413333 87.238304 7
GCACT 3618370 2.933489 51.920753 14
AACAT 3437995 2.928229 84.616425 1
AATCC 3155285 2.8982477 87.91597 8
GTAGT 4838120 2.8773634 85.24328 5
TTGTA 4310580 2.8076668 81.51568 13
GTGGA 5090010 2.764044 49.91978 22
ACTGA 3626430 2.7261746 68.34452 12
TGATG 4432030 2.6358507 53.989037 14
GTAGA 4260005 2.620969 59.882305 8
CCCAA 2545760 2.6088266 59.12435 4
GCTGT 4028650 2.5838945 63.49552 11
CAACG 3004815 2.52013 79.98173 7
AGTTG 4220730 2.510185 44.26008 9
CAGTC 3067780 2.4871142 14.815685 42
AGAAC 2985115 2.3215027 57.837868 15
GGTAG 4267455 2.3173695 76.95786 4
TCCCA 2299750 2.27811 57.190052 3
TAGTA 3378465 2.2764754 96.547806 6
ATTCA 2729275 2.2470536 82.14505 4
GTTGA 3752525 2.23173 50.14355 18
CTGTT 3162840 2.2216938 66.8712 19
GTTTG 3832535 2.2032843 61.733326 20
CAAGT 2906365 2.1848648 88.06758 3
CTGAT 2974905 2.161791 66.3251 13
TAGTT 3299515 2.1491165 78.78544 18
GCTTG 3350390 2.1488721 61.311386 20
TGAGG 3956940 2.1487496 76.59075 1
AGCTG 3236365 2.1473677 49.092648 2
AGCTT 2939580 2.1361215 65.70388 2
AGGTA 3450830 2.1231241 90.183876 3
AAGCT 2756885 2.0724928 56.06705 1
ATCCA 2250215 2.066907 87.917625 9
TCAAC 2239080 2.056679 88.96276 6
TCGGT 3180090 2.0396452 63.253094 15
CATTC 2296010 2.0386236 88.73558 3
CACTA 2200725 2.0214486 58.575554 15
TCAAG 2664065 2.0027153 87.74483 2
CAGGA 2896880 1.9884428 81.88707 12
AAAGC 2552940 1.9854031 50.00591 11
AAGCA 2544850 1.9791114 49.943165 12
AGCAC 2357030 1.9768345 53.811104 13
ACATT 2397280 1.9737171 82.03334 2
GAGGT 3634260 1.9735237 79.698296 2
GTAAT 2903440 1.9563944 79.15484 6
CTGTC 2479805 1.9433692 77.48836 12
CTTGT 2766210 1.9430864 43.291553 8
AGTAA 2783640 1.9403961 81.880394 5
TGTAT 2960575 1.9283502 76.27695 14
GGCTT 2961770 1.8996191 68.01369 19
AGACT 2525065 1.898222 68.56234 10
ACTAC 2059760 1.891967 58.424377 16
TTGAC 2598980 1.8886158 40.863754 19
CCTTG 2398515 1.879664 64.70708 10
TCTCC 1938350 1.8560623 54.86813 1
CTACT 2087595 1.8535721 56.202248 17
AGGAT 3008950 1.8512571 72.19528 13
TAATC 2237920 1.8425136 78.79622 7
TGACT 2530425 1.8387985 36.61625 20
CCAGG 2479805 1.8356813 72.22047 11
AACGC 2181940 1.8299869 80.07248 8
CAGTG 2756085 1.8286961 31.049421 18
TACCA 1984580 1.8229113 53.093826 15
ATAGT 2685445 1.8095051 77.77147 17
AGTCA 2390770 1.7972655 13.73313 43
CAGAC 2135985 1.7914447 76.224686 9
AGGCT 2681590 1.7792675 60.89676 18
GTATA 2640020 1.7788969 77.160805 15
TCAGA 2330880 1.7522428 69.63298 8
ACGCT 2160835 1.7518348 77.38969 9
TATAG 2595560 1.7489389 76.88471 16
TATCA 2117300 1.7432053 74.7814 6
AGTTT 2675395 1.7426003 55.92031 19
ACTGG 2613010 1.733764 31.585665 15
TTATC 2175745 1.7315714 72.28546 5
AACTG 2293585 1.7242063 55.56545 17
AAGAA 2383060 1.7184856 54.370914 14
GGATA 2774695 1.7071316 72.136314 14
CAGTT 2348730 1.7067652 54.086628 8
ATTGT 2608595 1.6990905 63.644238 12
ATAGG 2744860 1.6887759 72.84057 16
AACCC 1647600 1.6884162 59.22679 7
GATAG 2737035 1.6839616 73.26463 15
CGCTG 2321455 1.6611403 68.4396 10
CTTAT 2081750 1.6567655 72.07809 4
TGCAC 2006440 1.6266632 52.2986 4
TAGAT 2409340 1.6234602 65.14668 9
ATCAG 2158900 1.6229566 68.32609 7
TCTGA 2222660 1.615153 9.806325 18
ACCAG 1918375 1.6089357 47.86641 16
GATGG 2940765 1.596933 25.689102 21
CTCCC 1493240 1.5952208 61.552315 2
TGTGG 3013045 1.5816058 23.061256 21
AGATT 2327145 1.5680758 65.27995 10
TCACT 1757245 1.5602549 16.23749 45
TAGCT 2134160 1.5508424 65.46984 1
GTCAC 1910915 1.549219 14.827592 44
ACCCT 1563880 1.5491644 57.304096 8
CTGCC 1766585 1.5445541 64.87542 4
GATTG 2591675 1.5413408 58.432663 11
GCTTA 2079685 1.5112567 65.81918 3
AGTGG 2768945 1.503629 18.12202 21
ACTGT 2052440 1.4914584 53.492443 18
GATGT 2493330 1.4828523 53.998676 15
TAGGC 2225015 1.4763244 62.11282 17
TGTCG 2295685 1.4724057 63.329865 13
ATGTT 2228025 1.4512088 59.121677 16
ATCCC 1458145 1.4444242 57.642643 8
GTCGG 2450810 1.4352683 57.879044 14
CGGTG 2443370 1.4309113 57.571682 16
TACTT 1788555 1.4234256 45.33685 18
CACTT 1594615 1.4158561 54.77301 6
CCAAC 1363760 1.3975446 59.290924 5
CAACC 1361620 1.3953516 59.244892 6
AAAGT 1993505 1.3896153 46.42363 4
TCCTT 1617075 1.387905 21.940472 11
CATAA 1611075 1.3721943 54.437744 1
GCCAG 1816840 1.3449199 55.051704 6
CCCTT 1400015 1.3405809 55.610226 9
TAGAA 1902055 1.3258681 44.866623 8
ATAAA 1676010 1.3236687 50.56858 2
AGAAA 1809325 1.3047508 49.27498 9
CACTG 1579520 1.2805504 10.594663 45
GGTGA 2313860 1.2565026 50.073196 17
TCCCG 1434240 1.2539796 41.17477 12
TGAAG 2033500 1.2511114 45.89929 12
GCCTG 1729470 1.2375395 33.320457 17
GCTGC 1728905 1.2371353 53.06136 3
TTGAA 1829930 1.2330425 50.278202 11
ATTGC 1694700 1.2314974 46.771816 2
GCTGG 2101710 1.2308248 16.917028 2
TTGTC 1752125 1.2307563 43.30325 9
TATTG 1874495 1.2209396 31.736216 1
GTAAA 1741485 1.2139394 35.474403 2
CATCC 1223395 1.2118832 51.105217 7
TGAGT 2032560 1.2088195 47.17585 19
TGTAC 1651635 1.2002032 41.98803 13
TTGCA 1648090 1.197627 46.8771 3
TAAAG 1716255 1.1963522 44.708725 3
ACATC 1274160 1.1703638 47.46848 6
CTGTG 1791645 1.1491247 20.995066 21
AAACA 1297185 1.1429715 45.486664 4
TCACA 1242430 1.1412187 28.510986 2
GAAGA 1773195 1.1286052 47.314034 13
GCAGC 1513710 1.1205271 27.789867 17
CCTGT 1411200 1.1059268 35.062965 18
ACAGT 1468260 1.1037669 22.001123 4
GTGAG 2000245 1.0861993 44.541447 18
CACAG 1290770 1.0825652 26.147272 3
AGCAG 1563610 1.0732751 26.189676 16
GTACC 1323630 1.0730948 46.755234 14
TTCTG 1521730 1.0689185 17.770384 16
CCCGG 1335805 1.0663995 37.60659 13
GAAAG 1675135 1.0661918 41.218517 10
CAGAA 1364605 1.0612435 20.756393 26
AACTT 1272830 1.0479403 20.623125 29
TAAAC 1209345 1.0300304 43.973988 3
GTCCC 1166670 1.0200386 41.230907 11
TTTGT 1615025 1.0168467 17.981363 12
GGCCT 1408590 1.0079305 33.855618 16
CCGGC 1250725 0.9984784 37.604256 14
CCAAA 1031445 0.9801142 36.141598 11
CTGAG 1455920 0.9660206 5.593884 9
CGGCC 1209350 0.965448 37.63839 15
CTTTG 1364115 0.9582039 15.762707 17
TGCTG 1445020 0.92680645 9.942367 16
TGTAA 1361485 0.9173951 34.244453 1
GACTT 1238295 0.899839 21.102077 21
CTGAC 1107040 0.89750063 7.384689 45
TGTCC 1142155 0.895082 36.20812 10
CAGCT 1101130 0.89270943 32.685238 18
CCTGG 1244905 0.89080423 5.173923 20
ACTTT 1113730 0.8863646 16.971872 16
CAAAA 984725 0.8676578 33.87152 12
CTCCT 904260 0.86587197 24.407598 10
GGCTG 1440990 0.8438872 15.659618 1
TTTTG 1332135 0.8387344 16.402136 14
CTGAA 1109745 0.83425254 6.831445 6
TGTTT 1322530 0.83268684 8.420036 19
AGTGT 1372585 0.8163143 21.997555 19
CCAGA 945025 0.79258984 22.386282 25
GCTAA 1051060 0.7901361 30.033495 10
GAGTT 1322075 0.78627455 29.49974 20
TATGG 1320255 0.7851921 9.471779 22
TCAGT 1073385 0.7800029 15.286933 1
AGCTC 943290 0.7647452 10.683643 7
AAAAG 1060125 0.7644833 27.622467 13
GAATC 1012645 0.76125765 28.665016 6
TAGTG 1274195 0.75779897 16.872536 15
TGGCT 1172030 0.7517163 19.092697 8
CCCCC 625350 0.74532413 13.739944 1
ATTGG 1248595 0.7425739 10.518647 16
CGGAA 1079900 0.7412524 26.138105 4
GAAGC 1064930 0.730977 24.301346 19
CAAAG 937130 0.7287992 25.102463 1
CATTG 998020 0.72523695 11.274952 1
ATCCT 816635 0.72508883 28.011892 8
TACAG 946290 0.71137506 14.961863 10
AGGTT 1183335 0.70376205 13.907743 18
ACGGA 1005585 0.690242 26.13131 3
CTTTT 887290 0.6825969 19.6512 13
GTGAT 1141935 0.67914027 8.612682 5
GAGCT 1018725 0.6759364 8.565916 6
CTTGA 926210 0.6730543 17.944944 11
GGGTT 1252960 0.657703 14.267965 19
CATGG 987820 0.6554306 5.1431513 21
TAGGT 1102015 0.6553987 13.604243 17
TGACC 800015 0.6485891 5.602952 45
TCCGA 793520 0.6433234 23.377935 7
GGTTT 1117880 0.64265746 10.222504 19
AACGG 921500 0.6325254 26.065813 2
CTACA 685095 0.6292855 17.458202 9
GGCTA 942990 0.62568533 19.477303 9
GTCTG 974365 0.6249379 7.553462 17
AAGTT 918305 0.6187718 19.779196 13
TTACC 682170 0.60569763 23.682682 22
TTCAC 675605 0.5998686 25.752432 1
AGAAT 860190 0.5996139 17.846039 4
TTGAT 919470 0.5988905 18.339622 19
AGTTC 812715 0.59058034 21.287409 14
GTTTC 838680 0.5891193 5.548249 25
CTATG 808755 0.5877027 6.7353163 4
CCCCG 595880 0.58124363 19.707233 10
GCTTT 826825 0.58079207 12.344659 20
CAGCA 684265 0.57389116 18.688997 4
ATCTG 789625 0.57380134 6.8698196 8
CCTAC 575690 0.5702729 10.982438 10
TAGCA 758465 0.5701773 24.11022 1
CTAAG 751720 0.56510675 22.062315 11
TGTCT 801020 0.5626656 11.06019 10
CCGAT 689595 0.5590693 21.916348 8
TCCCC 521760 0.5573936 21.579914 9
GACCT 687285 0.5571965 5.6332664 3
AAAGA 772550 0.5571056 18.380917 2
TAAAT 726105 0.55433005 13.980068 11
AATGG 888890 0.5468898 5.4008317 22
CCTTT 636780 0.54653627 21.90007 12
TGAAA 783740 0.54632276 7.264499 11
GGTTA 914740 0.54402107 16.002764 20
CTCAC 548950 0.5437845 12.666712 9
TTCAG 745625 0.5418276 17.18812 10
GGTCC 755530 0.54062706 20.702227 5
TAAGT 791740 0.5334898 19.773012 12
TCCTA 598175 0.5311186 9.873483 9
TTGTT 841370 0.5297405 10.943341 19
GGAAG 940145 0.528147 21.35308 18
ATTTG 806420 0.5252562 7.0216103 15
TTATG 799525 0.5207651 6.5538573 21
CTGTA 709205 0.515362 14.256343 19
AGTGC 769765 0.5107485 13.885513 3
TGGTA 858590 0.51062715 15.990486 12
GTGCA 768230 0.5097299 13.876554 4
GTCCG 711900 0.5094071 20.688568 6
GTTCT 718080 0.5044055 17.710773 15
GTGCT 775905 0.49764973 9.860466 15
ACAGA 638435 0.49650627 16.628624 11
CTGCT 632455 0.49564123 8.414978 8
CTGGT 772065 0.4951868 18.816671 3
GGGCT 843490 0.49397323 14.010184 18
TTGTG 858730 0.49367487 9.972351 13
CGATG 741345 0.49189147 18.058493 9
ACCCA 479900 0.4917887 8.116787 14
GTGTG 936315 0.49148992 16.39664 20
GGTTG 934170 0.49036396 11.653957 11
CCTAT 551850 0.4899867 7.321046 3
CCCAG 540360 0.48874858 7.168732 15
CCGAC 539530 0.48799786 18.354136 12
GGCCC 609875 0.4868752 5.964277 13
TGGTC 755820 0.4847676 18.46773 4
GGTCT 747765 0.47960132 10.034437 16
ATGGT 797690 0.47440827 15.984496 11
CGGTC 660750 0.47280627 11.1688175 15
TTTCC 549585 0.47169843 6.3039894 8
CCCGA 518630 0.46909407 18.281519 11
TAATT 632005 0.46639708 16.063753 7
TGGGT 884700 0.46439618 14.0905695 18
GTTAC 636615 0.4626127 19.389622 21
CGACT 568570 0.46095175 16.889212 13
GAGTG 839550 0.4559035 16.372557 20
ACCAT 495460 0.45509863 9.00978 5
CCCCA 410855 0.45406023 12.563114 3
CGTGG 769225 0.45048138 7.764984 21
CACCA 436760 0.44757998 10.008774 4
TTCCT 513055 0.44034544 6.3273554 9
GTGGC 747150 0.43755358 17.69149 7
GTTGT 757865 0.43568864 12.361851 12
CTCAG 536390 0.4348627 8.6614485 18
GTGTT 740510 0.42571142 6.39196 20
TCTGT 603570 0.4239695 13.17784 17
TGACA 559505 0.4206088 5.188617 14
ACTCT 472035 0.41911912 5.3482103 15
GTGGG 873115 0.41847768 12.86773 17
ATGAA 590220 0.41142547 7.834442 8
CCCAC 372160 0.41129607 11.8032055 4
TGGGC 701755 0.4109689 15.241791 17
CACGT 504715 0.40918314 14.18199 7
TGAGC 616400 0.4089889 5.2993283 30
TCAGG 612545 0.40643105 14.704341 11
GTCTC 517105 0.40524393 12.228651 11
GCTGA 599825 0.39799118 6.3779325 8
TTTCT 516270 0.3971693 6.1228065 26
TGAAT 586970 0.3955118 6.651962 9
GAAAT 562840 0.3923397 6.9925323 12
CCACT 392045 0.38835597 10.579511 5
GATGA 629915 0.38755536 9.917377 7
AAATA 489005 0.38620332 14.184014 12
AAATC 452390 0.38531226 8.345501 13
AAACC 405280 0.38511088 7.582693 12
TGGAT 643390 0.3826418 5.6193476 17
TTGGG 728390 0.38234603 14.040835 16
GAAAC 482070 0.3749024 6.2788224 11
AAATT 489530 0.3737217 8.22271 13
AATTT 506115 0.37349477 7.9376364 14
CATCT 419800 0.37273973 7.5678563 7
GCTCA 459415 0.37245747 10.619718 8
TTTGA 570005 0.3712689 6.955923 16
ACACA 390450 0.3710189 5.289091 2
TCGAG 547605 0.36334258 8.468895 1
GCACC 400830 0.36254552 9.040523 3
AGGCC 487375 0.36078042 5.6410937 12
AATTG 530565 0.35750502 8.556118 11
CTTTA 448365 0.35683227 5.7857633 15
AGTCT 484010 0.3517184 9.894242 14
CACTC 351325 0.34801915 6.3942413 14
ATTGA 512390 0.34525836 8.562014 12
GTAGG 634145 0.34436175 11.988787 8
CGAGG 566270 0.34306842 7.7386956 2
CTGGC 464995 0.33273178 7.509604 21
TTTAT 464665 0.33146805 5.2527704 16
CTAGA 439315 0.33025578 5.8986316 1
CGTAA 433700 0.3260347 13.156812 9
GAGGA 577830 0.32460868 7.2134604 3
AATAT 424735 0.3242553 13.340949 13
GCACG 435165 0.3221319 12.979393 6
ATATT 436365 0.32202175 12.889298 14
ACTGC 395430 0.32058346 8.685579 7
CAGAG 452955 0.31091213 5.49301 17
GTTTT 487985 0.30724347 5.91233 20
ACCTA 333970 0.306764 6.264829 4
ACGTA 405960 0.3051811 13.146494 8
GTCTA 418765 0.30430636 9.790093 15
GGAGC 500105 0.30298308 7.781529 5
TGTGC 469420 0.30107644 9.813998 14
GCCCC 305515 0.29801077 7.219058 14
ATGCT 409190 0.29734847 6.188458 6
GTACA 390935 0.29388604 5.934681 15
CTAGT 403640 0.2933154 8.830052 17
GTTAT 443005 0.28854826 6.5945497 20
AATCG 378300 0.28438765 7.172087 14
GCTCC 323675 0.2829944 7.069354 11
CCATC 284510 0.28183284 8.33547 6
CACAA 296335 0.28158763 5.2674665 3
CTCGC 317640 0.27771786 5.412794 26
TCTAG 374890 0.27242348 9.159671 16
CCTCA 271205 0.26865304 7.1529455 17
ATCGG 404195 0.2681883 6.330687 15
CCCCT 249560 0.26660368 7.8820057 15
TGCTA 360555 0.26200655 7.7438736 9
TCTGC 332755 0.26077285 6.9599714 17
AGAGC 379055 0.26018658 5.5396624 11
TATGC 357510 0.25979385 6.1713786 5
CTAAA 304650 0.25947827 9.09756 11
TTGGC 391350 0.25100392 8.897708 17
GCCTA 302725 0.24542555 6.3360333 2
CCCTC 229540 0.24521644 7.736878 16
GCGTG 417235 0.24434543 7.498973 20
TAGAC 324160 0.24368781 5.9128976 2
AGGAG 423885 0.23812668 7.178068 4
ACACT 256610 0.23570593 5.906823 13
AAGTG 370555 0.22798406 5.5317254 3
TGCCT 290275 0.2274822 6.4246483 1
GGCGT 383845 0.22479123 7.881997 19
ACAGC 267945 0.22472471 5.5675817 16
GTATT 335275 0.21837907 5.2935567 21
CAGCC 239975 0.21705426 5.643498 17
GCTCG 301545 0.21577354 5.225146 2
TGGCG 361545 0.21173167 7.5429626 18
CGGTT 278875 0.17886478 5.676426 17
TACAC 168675 0.15493432 5.832892 12